STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13898.1Hypothetical protein; KEGG: ptr:451947 homeobox C10. (614 aa)    
Predicted Functional Partners:
AFM13893.1
PFAM: Endonuclease I; COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: fps:FP0696 extracellular ribonuclease precursor; PFAM: Endonuclease I; SPTR: Probable extracellular ribonuclease.
       0.523
AFM13894.1
Hypothetical protein.
       0.523
AFM13895.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: chl:Chy400_0854 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase.
       0.523
AFM13896.1
Hypothetical protein.
       0.523
AFM13897.1
Hypothetical protein.
       0.523
AFM13899.1
PFAM: Phosphorylase superfamily; TIGRFAM: AMP nucleosidase; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845; KEGG: sna:Snas_3407 AMP nucleosidase; PFAM: Nucleoside phosphorylase; SPTR: AMP nucleosidase.
       0.455
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.