STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13901.1Alpha/beta hydrolase fold containing protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: afw:Anae109_2061 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold. (300 aa)    
Predicted Functional Partners:
AFM13825.1
PFAM: Acyltransferase; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: bba:Bd2719 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein.
  
 
 0.731
AFM12428.1
KEGG: mxa:MXAN_6790 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.586
AFM13900.1
Diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: bac:BamMC406_5496 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: GGDEF domain-containing protein; TIGRFAM: Diguanylate cyclase, predicted.
  
    0.560
AFM12641.1
PFAM: Fatty acid desaturase; InterPro IPR005804; KEGG: mxa:MXAN_6958 fatty acid desaturase family protein; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase family protein.
  
     0.422
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.