STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13968.1PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430; KEGG: plasmid maintenance system antidote protein, XRE family; SPTR: Plasmid maintenance system antidote protein, XRE family; TIGRFAM: Addiction module antidote protein, HigA. (105 aa)    
Predicted Functional Partners:
AFM13967.1
PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: glo:Glov_0607 plasmid maintenance system killer; PFAM: Plasmid maintenance system killer; SPTR: Plasmid maintenance system killer protein; manually curated.
 
 
 
 0.994
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.