STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14065.1PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: cbd:CBUD_0131 hypothetical cytosolic protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein. (97 aa)    
Predicted Functional Partners:
AFM14064.1
KEGG: dol:Dole_0659 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.952
AFM12368.1
KEGG: nhl:Nhal_1268 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.807
AFM13954.1
PFAM: Protein of unknown function (DUF497); COGs: COG2929 conserved hypothetical protein; InterPro IPR007460; KEGG: rpb:RPB_3765 hypothetical protein; PFAM: Protein of unknown function DUF497; SPTR: Putative uncharacterized protein.
  
     0.772
AFM12163.1
KEGG: cyh:Cyan8802_3952 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.677
AFM12071.1
PFAM: Protein of unknown function (DUF3680); KEGG: sus:Acid_6542 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.448
AFM11989.1
PFAM: Protein of unknown function (DUF3680); KEGG: sus:Acid_6542 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.432
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.