STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14171.1H+transporting two-sector ATPase alpha/beta subunit central region; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; COGs: COG1156 H+-ATPase subunit B; InterPro IPR004100:IPR000194; KEGG: osp:Odosp_1935 H(+)-transporting two-sector ATPase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; SPTR: V-type ATPase, subunit B. (436 aa)    
Predicted Functional Partners:
AFM14168.1
Hypothetical protein; KEGG: pdi:BDI_0825 ATP synthase subunit E; SPTR: V-type ATPase subunit E.
 
 0.999
AFM14169.1
PFAM: Protein of unknown function (DUF2764); KEGG: brm:Bmur_1549 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 0.999
AFM14170.1
H+transporting two-sector ATPase alpha/beta subunit central region; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; COGs: COG1155 H+-ATPase subunit A; InterPro IPR004100:IPR000194; KEGG: bhy:BHWA1_01914 V-type ATP synthase subunit A; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; SPTR: V-type ATP synthase subunit A.
 
0.999
AFM14172.1
H+transporting two-sector ATPase D subunit; PFAM: ATP synthase subunit D; InterPro IPR002699; KEGG: bpo:BP951000_1034 V-type ATP synthase subunit D; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATP synthase subunit D.
 
 0.999
AFM14174.1
H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: osp:Odosp_1932 H+transporting two-sector ATPase C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: V-type ATP synthase subunit K.
 
 0.999
AFM14173.1
PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: bvu:BVU_3562 putative V-type ATP synthase subunit I; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: Putative uncharacterized protein; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.998
atpE
ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.989
AFM10959.1
KEGG: rsc:RCFBP_21365 hypothetical protein; SPTR: Transmembrane protein.
  
 0.974
AFM12459.1
PFAM: Inorganic pyrophosphatase; COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: nde:NIDE3643 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; SPTR: Inorganic pyrophosphatase.
   
 
 0.933
AFM12009.1
Pyruvate carboxyltransferase; PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: rva:Rvan_0703 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; SPTR: Pyruvate carboxyltransferase.
 
    
 0.900
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.