STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14191.1AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: vap:Vapar_0150 ATPase AAA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase central domain protein. (728 aa)    
Predicted Functional Partners:
AFM13646.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: lic:LIC11847 AAA ATPase family protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA family ATPase.
 
  0.818
AFM14189.1
PFAM: Domain of unknown function (DUF932); InterPro IPR009276; KEGG: ote:Oter_1214 hypothetical protein; PFAM: Protein of unknown function DUF932; SPTR: Putative uncharacterized protein.
 
   
 0.805
AFM14188.1
PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR007627:IPR014284; KEGG: aar:Acear_1152 RNA polymerase, sigma 70 subunit, RpoD; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70.
       0.773
AFM14190.1
Hypothetical protein.
       0.773
AFM14192.1
Hypothetical protein.
       0.697
AFM11633.1
PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: oca:OCAR_5667 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
 
 0.642
AFM13154.1
PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: lbl:LBL_0820 deacetylase; PFAM: Histone deacetylase superfamily; SPTR: Deacetylase.
   
 0.642
AFM12093.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; PDZ domain (Also known as DHR or GLGF); COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR000866; KEGG: fsu:Fisuc_0103 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: PDZ/thioredoxin domain protein.
  
 0.617
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.615
AFM14186.1
PFAM: Rad52/22 family double-strand break repair protein; COGs: COG4712 conserved hypothetical protein; InterPro IPR007232; KEGG: llc:LACR_2129 hypothetical protein; PFAM: Rad52/22 double-strand break repair protein; SPTR: Prophage protein.
       0.592
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.