STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14199.1PFAM: Predicted nucleotide-binding protein containing TIR-like domain; COGs: COG4271 nucleotide-binding protein containing TIR -like domain; InterPro IPR019302; KEGG: tbd:Tbd_0816 hypothetical protein; PFAM: Nucleotide-binding protein, predicted, TIR-like; SPTR: Putative uncharacterized protein. (161 aa)    
Predicted Functional Partners:
AFM14200.1
KEGG: cbk:CLL_A1352 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.678
AFM14201.1
Helicase domain-containing protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; InterPro IPR000330:IPR001650:IPR014001; KEGG: cbi:CLJ_B2284 helicase, SNF2 family; PFAM: DNA/RNA helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Helicase domain protein.
       0.678
AFM14202.1
PFAM: Protein of unknown function (DUF1156); COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; InterPro IPR009537; KEGG: tro:trd_A0280 DNA methylAse containing a Zn-ribbon; PFAM: Protein of unknown function DUF1156; SPTR: Putative uncharacterized protein.
       0.678
AFM14203.1
KEGG: cbi:CLJ_B2286 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.600
AFM14204.1
PFAM: Protein of unknown function (DUF499); COGs: COG1483 ATPase (AAA+ superfamily); KEGG: cbi:CLJ_B2287 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.600
AFM14198.1
Protein of unknown function DUF1863; PFAM: MTH538 TIR-like domain (DUF1863); InterPro IPR015032; KEGG: slp:Slip_1610 domain of unknown function DUF1863; PFAM: MTH538 TIR-like domain; SPTR: Putative uncharacterized protein.
       0.554
AFM14197.1
KEGG: tde:TDE1619 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.452
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.