STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14254.1PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: bpo:BP951000_2277 ABC transporter permease-like protein; PFAM: Protein of unknown function DUF140; SPTR: ABC-type transport system permease protein-like protein; TIGRFAM: Protein of unknown function DUF140. (269 aa)    
Predicted Functional Partners:
AFM14255.1
PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1120 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein.
 0.997
AFM13327.1
PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: saf:SULAZ_1668 methionine import ATP-binding protein MetN; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Methionine import ATP-binding protein MetN.
 0.992
AFM13908.1
PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439; KEGG: glo:Glov_3182 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 0.992
AFM14256.1
Mammalian cell entry related domain protein; PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: sul:SYO3AOP1_0393 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related; SPTR: Mce related protein.
 
 0.989
AFM13907.1
Mammalian cell entry related domain protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: gur:Gura_1041 hypothetical protein; PFAM: Mammalian cell entry related; SPTR: Mammalian cell entry related domain protein.
 
 0.982
AFM14257.1
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: sat:SYN_00409 organic solvents resistance ABC transporter periplasmic protein; PFAM: Mammalian cell entry related; SPTR: ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.978
AFM13452.1
Mammalian cell entry related domain protein; PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: geo:Geob_2685 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related; SPTR: Mce family protein.
 
 0.945
AFM11029.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: bba:Bd1768 ABC transporter permease protein; PFAM: Protein of unknown function DUF140; SPTR: ABC transporter permease protein.
  
  
 
0.927
AFM13909.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: dak:DaAHT2_1300 protein of unknown function DUF140; PFAM: Protein of unknown function DUF140; SPTR: Putative uncharacterized protein.
  
  
 
0.920
AFM13451.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439; KEGG: hoh:Hoch_3439 ABC transporter; PFAM: ABC transporter-like; SPTR: ABC transporter related protein.
 
 
  0.841
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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