STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14354.1PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: lbj:LBJ_1652 acetyl esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl esterase. (334 aa)    
Predicted Functional Partners:
AFM14355.1
KEGG: scl:sce4396 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.558
AFM11682.1
PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: bmd:BMD_0768 hypothetical protein; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein.
  
    0.537
AFM12713.1
PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE); InterPro IPR001932:IPR011623:IPR010822; KEGG: lbl:LBL_2835 TPR repeat-containing protein; PFAM: Sporulation stage II, protein E C-terminal; Diverse 7TM receptor, transmembrane region; SMART: Protein phosphatase 2C-related; SPTR: TPR-repeat-containing protein.
  
     0.476
AFM14448.1
KEGG: lil:LA_2297 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.458
AFM14356.1
Rieske (2Fe-2S) iron-sulfur domain-containing protein; PFAM: Carboxymuconolactone decarboxylase family; Rieske [2Fe-2S] domain; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR003779:IPR017941; KEGG: mgm:Mmc1_0808 carboxymuconolactone decarboxylase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase.
       0.429
AFM11167.1
Diguanylate phosphodiesterase; PFAM: EAL domain; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: lic:LIC20198 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SPTR: Putative uncharacterized protein.
  
     0.424
AFM11555.1
KEGG: lbl:LBL_0375 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.412
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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