STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14355.1KEGG: scl:sce4396 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (281 aa)    
Predicted Functional Partners:
AFM11831.1
PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: cyh:Cyan8802_4292 FHA domain containing protein; PFAM: Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; SPTR: FHA domain containing protein.
  
 
 0.624
AFM14796.1
PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: azl:AZL_c04320 hypothetical protein; PFAM: Protein of unknown function DUF59; SPTR: Putative uncharacterized protein.
  
  
 0.617
AFM14356.1
Rieske (2Fe-2S) iron-sulfur domain-containing protein; PFAM: Carboxymuconolactone decarboxylase family; Rieske [2Fe-2S] domain; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR003779:IPR017941; KEGG: mgm:Mmc1_0808 carboxymuconolactone decarboxylase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase.
     
 0.582
AFM14354.1
PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: lbj:LBJ_1652 acetyl esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl esterase.
       0.558
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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