STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14360.1PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: lbf:LBF_0873 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (119 aa)    
Predicted Functional Partners:
AFM13294.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
   0.754
AFM12911.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: lic:LIC12787 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.730
AFM12579.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: lbf:LBF_3157 anti-sigma factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.717
AFM14361.1
PFAM: Cytidylyltransferase; COGs: COG1861 Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog; InterPro IPR003329; KEGG: lbl:LBL_2547 CMP-KDO synthetase related protein; PFAM: Acylneuraminate cytidylyltransferase; SPTR: CMP-KDO synthetase related protein.
   
   0.592
AFM11914.1
Integral membrane sensor hybrid histidine kinase; PFAM: 7TM diverse intracellular signalling; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003661:IPR001789:IPR001932:IPR011623:IPR003594:IPR0108 22; KEGG: lbf:LBF_0920 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Div [...]
 
 
 0.576
AFM14323.1
Protein serine/threonine phosphatase with extracellular sensor; PFAM: Stage II sporulation protein E (SpoIIE); Tetratricopeptide repeat; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003660:IPR010822:IPR001440:IPR001932:IPR019734; KEGG: lbf:LBF_0315 serine phosphatase RsbU; PFAM: Sporulation stage II, protein E C-terminal; HAMP linker domain; Tetratricopeptide TPR-1; SMART: Protein phosphatase 2C-related; Tetratricopeptide repeat; SPTR: Putative phosphoserine phosphatase.
 
 
 0.561
AFM13547.1
Anti-sigma-factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645; KEGG: saq:Sare_4413 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist.
  
     0.558
AFM10868.1
Hypothetical protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: lbl:LBL_0257 anti-sigma regulatory factor; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
AFM11806.1
KEGG: lic:LIC12942 hypothetical protein; SPTR: Anti-sigma regulatory factor.
  
 
 0.537
AFM12578.1
KEGG: lbl:LBL_1463 serine phosphatase RsbU, regulator of sigma subunit; SPTR: Putative uncharacterized protein.
  
 
 0.537
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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