STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14642.1InterPro IPR001127; KEGG: lbf:LBF_2490 hypothetical protein; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; SPTR: Putative uncharacterized protein. (262 aa)    
Predicted Functional Partners:
AFM12876.1
PFAM: ABC transporter; Predicted permease; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003838:IPR003593; KEGG: bba:Bd0709 macrolide ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; SMART: ATPase, AAA+ type, core; SPTR: Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.963
AFM12919.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR003423; KEGG: dak:DaAHT2_0587 acriflavin resistance protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.953
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
 0.863
AFM14643.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: lic:LIC12429 lipoprotein releasing system, permease component; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Permease component of lipoprotein releasing system.
 
 
 0.862
AFM12538.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: lbf:LBF_5039 permease component of an ABC transporter complex; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type transport system, permease; putative membrane protein; putative signal peptide.
  
 
 0.805
AFM12089.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036; KEGG: lbf:LBF_3033 cation transporter; PFAM: Acriflavin resistance protein; SPTR: Putative cation efflux system protein; putative membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.688
AFM12808.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: lbf:LBF_3033 cation transporter; PFAM: Acriflavin resistance protein; SPTR: Putative cation efflux system protein; putative membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.681
AFM12547.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: lbf:LBF_4085 efflux pump, AcrB family; PFAM: Acriflavin resistance protein; SPTR: Putative acriflavine resistance protein D; putative transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.669
AFM13755.1
Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: bba:Bd1145 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.649
AFM12877.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bba:Bd0708 macrolide-specific efflux protein; PFAM: Secretion protein HlyD; SPTR: Probable macrolide-specific efflux protein; TIGRFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.632
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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