STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14694.1PFAM: YhhN-like protein; InterPro IPR012506; KEGG: ran:Riean_0217 YhhN family protein; PFAM: YhhN-like; SPTR: YhhN family protein. (204 aa)    
Predicted Functional Partners:
AFM14695.1
Hypothetical protein.
       0.773
AFM14693.1
SpoVG family protein; PFAM: SpoVG; COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: has:Halsa_1998 SpoVG family protein; PFAM: Sporulation stage V, protein G; SPTR: SpoVG family protein; Belongs to the SpoVG family.
 
     0.676
AFM14696.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: mba:Mbar_A1824 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
       0.542
AFM14688.1
PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; InterPro IPR003088; KEGG: cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I.
       0.400
AFM14689.1
Hypothetical protein; PFAM: Cbb3-type cytochrome oxidase component FixQ.
       0.400
AFM14690.1
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: phe:Phep_2484 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monoha [...]
       0.400
AFM14691.1
PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; InterPro IPR004714; KEGG: mtt:Ftrac_1615 cytochrome oxidase maturation protein, cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: Cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type.
       0.400
AFM14692.1
PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834; KEGG: P-type HAD superfamily ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: E1-E2 ATPase subfamily, putative.
       0.400
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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