STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL84341.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (179 aa)    
Predicted Functional Partners:
murC
Hypothetical protein; Cell wall formation; Belongs to the MurCDEF family.
       0.826
KPL84796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.823
KPL84342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
       0.726
murD
Hypothetical protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
       0.723
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
       0.705
murF
Hypothetical protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
       0.705
KPL84346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
KPL84347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.683
rsmH
16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.673
mraZ
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.
       0.653
Your Current Organism:
Thermanaerothrix daxensis
NCBI taxonomy Id: 869279
Other names: Chloroflexi bacterium GNS-1, DSM 23592, JCM 16980, T. daxensis, strain GNS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.