STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL82859.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
KPL82964.1
Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
livG
Leucine/isoleucine/valine transporter ATP-binding subunit; Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
KPL82965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
       0.736
KPL82797.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.536
KPL82451.1
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.414
Your Current Organism:
Thermanaerothrix daxensis
NCBI taxonomy Id: 869279
Other names: Chloroflexi bacterium GNS-1, DSM 23592, JCM 16980, T. daxensis, strain GNS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.