STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ37025.1Plasmid segregation centromere-binding protein ParG; PFAM: Ribbon-helix-helix protein, copG family; InterPro IPR002145; KEGG: acr:Acry_3601 hypothetical protein; PFAM: CopG-like DNA-binding; SPTR: Putative transcriptional regulator. (80 aa)    
Predicted Functional Partners:
EIJ37024.1
Plasmid segregation oscillating ATPase ParF; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: tmz:Tmz1t_2401 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase.
       0.661
EIJ37022.1
PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: rsq:Rsph17025_4221 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein.
       0.420
EIJ37023.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: rsq:Rsph17025_4222 hypothetical protein; PFAM: Putative addiction module antidote protein, CC2985; SPTR: Putative uncharacterized protein; TIGRFAM: Putative addiction module antidote protein, CC2985.
       0.420
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.