STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ32864.1Thioredoxin-like protein-like protein; PFAM: Redoxin; COGs: COG2143 Thioredoxin-related protein; KEGG: lch:Lcho_0061 thioredoxin-like protein-like protein; SPTR: Thioredoxin-related protein-like protein. (350 aa)    
Predicted Functional Partners:
EIJ34664.1
Diheme cytochrome SoxA (sulfur oxidation); KEGG: alv:Alvin_2169 SoxA; SPTR: Sulfur oxidation protein SoxA.
 
     0.764
EIJ34672.1
Sulfate thiol esterase SoxB; PFAM: 5'-nucleotidase, C-terminal domain; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR008334:IPR006311; KEGG: dar:Daro_3128 sulfate thiol esterase SoxB; PFAM: 5'-Nucleotidase, C-terminal; SPTR: Sulfate thiol esterase SoxB.
 
     0.754
EIJ36129.1
KEGG: mpo:Mpop_4159 sulfur oxidation protein (SoxA); cytochrome c precursor; SPTR: Putative sulfur oxidation protein (SoxA); cytochrome c.
 
     0.739
EIJ34662.1
COGs: COG5501 secreted protein; InterPro IPR006311; KEGG: tgr:Tgr7_2221 sulfur oxidation protein SoxY-like protein; SPTR: Sulfur oxidation protein SoxY-like protein.
 
     0.737
EIJ34666.1
Thiosulfate-binding protein SoxY; COGs: COG5501 secreted protein; InterPro IPR006311; KEGG: tgr:Tgr7_2221 sulfur oxidation protein SoxY-like protein; SPTR: Sulfur oxidation protein SoxY-like protein.
 
     0.737
EIJ35619.1
PFAM: Rhodanese-like domain; InterPro IPR001763; KEGG: tbd:Tbd_1650 rhodanese-like protein; SMART: Rhodanese-like; SPTR: Rhodanese-like protein.
  
     0.714
EIJ34663.1
PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: tgr:Tgr7_2222 sulphur oxidation protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur oxidation protein SoxZ.
 
     0.699
EIJ34667.1
Sulfur compound chelating protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: tgr:Tgr7_2222 sulphur oxidation protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur oxidation protein SoxZ.
 
     0.699
EIJ36128.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: lch:Lcho_0066 putative cytochrome c SoxX protein; PFAM: Cytochrome c, class I; SPTR: Putative cytochrome c, putative SoxX protein.
 
     0.697
EIJ33859.1
Sulfur compound chelating protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: alv:Alvin_2112 SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur/thiosulfate oxidation protein SoxZ.
 
     0.686
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.