STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33020.1PFAM: N-6 DNA Methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: sun:SUN_2234 hypothetical protein; PFAM: DNA methylase, adenine-specific; SPTR: Putative uncharacterized protein. (1071 aa)    
Predicted Functional Partners:
EIJ35409.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ecq:ECED1_5212 type I restriction enzyme EcoAI specificity protein (S protein) (S.EcoAI); PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction enzyme EcoAI specificity protein (S protein) (S.EcoAI).
 
 
 0.802
EIJ34519.1
PFAM: Type I restriction modification DNA specificity domain; InterPro IPR000055; KEGG: mem:Memar_1093 restriction modification system DNA specificity subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I site-specific deoxyribonuclease.
  
   0.769
EIJ35172.1
Hypothetical protein; PFAM: Type I restriction modification DNA specificity domain; KEGG: apt:APA01_42410 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.742
EIJ34430.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: dze:Dd1591_4252 restriction modification system DNA specificity domain-containing protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction-modification system, S subunit.
   
   0.736
EIJ34488.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ser:SERP2471 type I restriction-modification system S subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Putative uncharacterized protein.
   
   0.736
EIJ35176.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: ddc:Dd586_0398 restriction modification system DNA specificity domain-containing protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Restriction modification system DNA specificity domain protein.
   
   0.736
EIJ34001.1
KEGG: npu:Npun_F4826 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
EIJ33114.1
PFAM: Protein of unknown function (DUF433); InterPro IPR007367; KEGG: rca:Rcas_0712 hypothetical protein; PFAM: Protein of unknown function DUF433; SPTR: Protein containing DUF433.
  
     0.569
EIJ35287.1
PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; KEGG: meh:M301_2118 adenine specific DNA methyltransferase; SPTR: Adenine specific DNA methyltransferase.
  
     0.569
EIJ36554.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase); InterPro IPR010106; KEGG: ter:Tery_3232 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.546
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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