STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33127.1PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: noc:Noc_1525 polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein. (224 aa)    
Predicted Functional Partners:
EIJ32847.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702:IPR003856; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.999
EIJ36603.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702:IPR003856; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.999
EIJ33038.1
Capsular exopolysaccharide family; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: noc:Noc_1497 protein-tyrosine kinase; SPTR: Protein-tyrosine kinase; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.998
EIJ34242.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856:IPR005702; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.998
EIJ34378.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856:IPR005702; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.998
EIJ36638.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702:IPR003856; KEGG: eba:ebA6797 exopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Exopolysaccharide biosynthesis protein; TIGRFAM: Exopolysaccharide synthesis protein.
 
 0.998
EIJ36640.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017473:IPR017475:IPR003362; KEGG: tcx:Tcr_1675 undecaprenyl-phosphate galactosephosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.990
EIJ33901.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: sbn:Sbal195_3032 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Bacterial sugar transferase family; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.989
EIJ35968.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: nis:NIS_1405 glycosyl transferase; PFAM: Bacterial sugar transferase; SPTR: Glycosyl transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.986
EIJ34244.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: noc:Noc_1503 binding-protein-dependent transport system protein; PFAM: O-antigen ligase-related; SPTR: Probable binding-protein-dependent transport system protein.
 
  
 0.802
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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