Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33328.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EIJ33326.1
KEGG: pol:Bpro_3746 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.527
EIJ33327.1
KEGG: tgr:Tgr7_0401 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.527
EIJ33325.1
KEGG: rce:RC1_1117 phage capsid protein, putative; SPTR: Phage capsid protein, putative.
       0.507
EIJ33318.1
Hypothetical protein.
       0.504
EIJ33319.1
Hypothetical protein.
       0.504
EIJ33320.1
Hypothetical protein.
       0.504
EIJ33321.1
Protein of unknown function Gp37; PFAM: Gp37 protein; InterPro IPR018602; KEGG: rce:RC1_1121 hypothetical protein; PFAM: Protein of unknown function Gp37; SPTR: Putative uncharacterized protein.
       0.504
EIJ33322.1
PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein; COGs: COG5005 Mu-like prophage protein gpG; InterPro IPR006522; KEGG: nma:NMA1849 hypothetical protein; PFAM: Phage virion morphogenesis (putative tail completion) protein; SPTR: Phage virion morphogeneis protein; TIGRFAM: Phage virion morphogenesis (putative tail completion) protein.
       0.504
EIJ33323.1
PFAM: Protein of unknown function (DUF1320); COGs: COG4387 Mu-like prophage protein gp36; InterPro IPR009752; KEGG: cro:ROD_47241 prophage membrane protein; PFAM: Protein of unknown function DUF1320; SPTR: Putative uncharacterized protein.
       0.504
EIJ33324.1
Hypothetical protein.
       0.504
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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