Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIJ33346.1PFAM: Mor transcription activator family; InterPro IPR014875; KEGG: dvm:DvMF_0721 Mor transcription activator domain protein; PFAM: Mor transcription activator; SPTR: Mor transcription activator domain protein. (126 aa)    
Predicted Functional Partners:
EIJ33343.1
PFAM: Bacteriophage Mu Gam like protein; COGs: COG4396 Mu-like prophage host-nuclease inhibitor protein Gam; InterPro IPR009951; KEGG: tgr:Tgr7_0417 Mu Gam family protein; SPTR: Mu Gam family protein.
       0.795
EIJ33345.1
PFAM: Protein of unknown function (DUF1018); InterPro IPR009363; KEGG: das:Daes_2435 Mu GP16 GemA; PFAM: Protein of unknown function DUF1018; SPTR: Mu GP16 GemA.
       0.795
EIJ33344.1
Hypothetical protein.
       0.773
EIJ33338.1
Phage DNA transposition protein; COGs: COG2842 Uncharacterized ATPase putative transposase; KEGG: tgr:Tgr7_0412 phage DNA transposition protein; SPTR: Putative phage DNA transposition protein.
       0.709
EIJ33341.1
KEGG: mfa:Mfla_2720 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.709
EIJ33339.1
Hypothetical protein.
       0.678
EIJ33340.1
Hypothetical protein.
       0.678
EIJ33342.1
Hypothetical protein.
       0.678
EIJ33337.1
Integrase catalytic region; PFAM: Mu transposase, C-terminal; Integrase core domain; InterPro IPR001584; KEGG: bcj:BCAL1592 putative phage transposition protein; PFAM: Integrase, catalytic core; SPTR: Putative phage transposition protein.
       0.591
EIJ33334.1
InterPro IPR007492; PFAM: LytTr DNA-binding region.
       0.560
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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