STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33407.1UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family; COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594; KEGG: har:HEAR2600 putative molybdenum cofactor biosynthesis protein MoeB; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: Putative uncharacterized protein. (254 aa)    
Predicted Functional Partners:
EIJ34897.1
PFAM: Thiazole biosynthesis protein ThiG; COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; HAMAP: Thiazole biosynthesis; InterPro IPR008867; KEGG: tgr:Tgr7_3236 thiazole biosynthesis family protein; PFAM: Thiazole biosynthesis; SPTR: Thiazole synthase.
 
  0.917
EIJ33406.1
PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: tkm:TK90_1939 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase.
       0.786
EIJ33404.1
Protein of unknown function DUF2065; PFAM: Uncharacterized protein conserved in bacteria (DUF2065); InterPro IPR019201; KEGG: tgr:Tgr7_0901 hypothetical protein; PFAM: Protein of unknown function DUF2065; SPTR: Putative uncharacterized protein; manually curated.
  
    0.648
EIJ33402.1
Protease FtsH subunit HflK; PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR010201:IPR001107; KEGG: mmt:Metme_2843 HflK protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflK protein; TIGRFAM: HflK.
       0.642
EIJ33403.1
Protease FtsH subunit HflC; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR010200:IPR001107; KEGG: mca:MCA1980 HflC protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflC protein; TIGRFAM: HflC.
       0.642
EIJ33405.1
TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; HAMAP: ATP phosphoribosyltransferase regulatory subunit; InterPro IPR004517:IPR002314; KEGG: tgr:Tgr7_0902 histidyl-tRNA synthetase 2; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; SPTR: ATP phosphoribosyltransferase regulatory subunit; TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative.
       0.642
EIJ33408.1
Protein of unknown function DUF2189, transmembrane; PFAM: Predicted integral membrane protein (DUF2189); COGs: COG5473 integral membrane protein; InterPro IPR018692; KEGG: abo:ABO_1323 hypothetical protein; PFAM: Protein of unknown function DUF2189, transmembrane; SPTR: Putative uncharacterized protein.
       0.634
EIJ34853.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: mmt:Metme_0803 UBA/THIF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdopterin biosynthesis protein MoeB.
 
0.575
EIJ34009.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: nhl:Nhal_0256 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: UBA/THIF-type NAD/FAD binding protein.
 
0.570
EIJ34594.1
PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; InterPro IPR003749:IPR010034; KEGG: nhl:Nhal_0519 molybdopterin converting factor, subunit 1; PFAM: ThiamineS; SPTR: ThiamineS; TIGRFAM: Molybdopterin converting factor, subunit 1.
    
  0.524
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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