STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33412.1PFAM: Protein of unknown function (DUF938); InterPro IPR010342; KEGG: tbd:Tbd_0032 hypothetical protein; PFAM: Protein of unknown function DUF938; SPTR: Putative uncharacterized protein. (198 aa)    
Predicted Functional Partners:
EIJ33192.1
PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P-protein; InterPro IPR020580:IPR003437; KEGG: csa:Csal_1811 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating] 1; TIGRFAM: Glycine cleavage system P-protein.
    
  0.821
EIJ33413.1
UPF0145 protein ybjQ; PFAM: Domain of unknown function (DUF74); COGs: COG0393 conserved hypothetical protein; HAMAP: UPF0145 protein ybjQ; InterPro IPR002765; KEGG: rmr:Rmar_1926 hypothetical protein; PFAM: Uncharacterised protein family UPF0145; SPTR: UPF0145 protein Rmar_1926.
       0.558
EIJ33414.1
Nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease homolog; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: mep:MPQ_2048 nuclease; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); SPTR: Nuclease (SNase domain protein).
       0.558
EIJ36307.1
KEGG: hau:Haur_3960 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase.
     
 0.516
EIJ34820.1
PFAM: Protein of unknown function, DUF482; COGs: COG3146 conserved hypothetical protein; InterPro IPR007434; KEGG: tcx:Tcr_1140 hypothetical protein; PFAM: Protein of unknown function DUF482; SPTR: Putative uncharacterized protein.
 
     0.512
EIJ33411.1
PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591; KEGG: tkm:TK90_1786 ATPase-like, ParA/MinD; PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; SPTR: ATPase-like, ParA/MinD.
       0.470
EIJ35435.1
Protein of unknown function DUF2006; PFAM: Hydroxyneurosporene synthase (CrtC); COGs: COG5621 secreted hydrolase; InterPro IPR018549; KEGG: tgr:Tgr7_1993 secreted hydrolase-like protein; PFAM: Protein of unknown function DUF2006; SPTR: Secreted hydrolase-like protein.
  
  
  0.445
EIJ33415.1
KEGG: ppr:PBPRB1936 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.413
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.