STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33441.1Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; InterPro IPR000209:IPR003367; KEGG: mar:MAE_12430 hypothetical protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Thrombospondin, type 3-like repeat; SPTR: Peptidase S8 and S53, subtilisin, kexin, sedolisin. (861 aa)    
Predicted Functional Partners:
EIJ34184.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Bacterial pre-peptidase C-terminal domain; Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209:IPR007280; KEGG: bpl:BURPS1106A_A2709 serine metalloprotease; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Peptidase, C-terminal, archaeal/bacterial; SPTR: Serine metalloprotease.
 
 
0.937
EIJ34338.1
PFAM: Collagen triple helix repeat (20 copies); InterPro IPR008160; KEGG: mlo:mlr0585 hypothetical protein; PFAM: Collagen triple helix repeat; SPTR: Hypothetical glycine-rich protein.
 
 0.916
EIJ35337.1
Hypothetical protein; KEGG: geb:GM18_0409 FG-GAP repeat-containing protein; SPTR: FG-GAP repeat protein.
  
 0.913
EIJ34156.1
Thrombospondin type 3 repeat-containing protein; InterPro IPR003367; KEGG: son:SO_4025 OmpA-like transmembrane domain-containing protein; PFAM: Thrombospondin, type 3-like repeat; SPTR: OmpA-like transmembrane domain protein.
 
0.908
EIJ32790.1
PFAM: Cna protein B-type domain; Proprotein convertase P-domain; InterPro IPR002884:IPR008454:IPR002126:IPR006626; KEGG: hau:Haur_1649 Cna B domain-containing protein; PFAM: Collagen-binding surface protein Cna-like, B region; Proprotein convertase, P; Cadherin; SMART: Cadherin; Parallel beta-helix repeat; SPTR: Cna B domain protein.
  
 0.903
EIJ32791.1
PFAM: Cna protein B-type domain; InterPro IPR008454:IPR002126:IPR006626; KEGG: hhy:Halhy_1831 Cadherin repeat-containing protein; PFAM: Collagen-binding surface protein Cna-like, B region; Cadherin; SPTR: Cadherin repeat protein.
  
 0.903
EIJ33166.1
KEGG: cyj:Cyan7822_1900 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 0.903
EIJ33460.1
KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 0.903
EIJ33494.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1083); InterPro IPR010502; KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 0.903
EIJ33703.1
KEGG: rru:Rru_A0873 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 0.903
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.