STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33527.1NAD pyrophosphatase/5'-nucleotidase NadN; PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; TIGRFAM: NAD pyrophosphatase/5'-nucleotidase NadN; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006420:IPR004843:IPR008334; KEGG: mme:Marme_2810 NAD pyrophosphatase/5'-nucleotidase NadN; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; SPTR: 5'-nucleotidase; TIGRFAM: NAD pyrophosphatase/5-nucleotidase NadN. (625 aa)    
Predicted Functional Partners:
EIJ32767.1
PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR005990:IPR001093:IPR000644; KEGG: tgr:Tgr7_1035 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase.
    
 0.902
EIJ33524.1
5'-Nucleotidase domain-containing protein; PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR008334; KEGG: bte:BTH_I0372 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase; SPTR: 2',3'-cyclic-nucleotide 2'-phosphodiesterase protein.
 
 
0.897
EIJ36823.1
Hypothetical protein; KEGG: dmo:Dmoj_GI21589 GI21589 gene product from transcript GI21589-RA; SPTR: GI21589.
    
 0.814
EIJ32768.1
PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR004739:IPR001674:IPR000991:IPR018318; KEGG: tgr:Tgr7_1036 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP syntha [...]
     
 0.790
EIJ36764.1
Pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721:IPR004821; KEGG: tgr:Tgr7_0878 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related.
   
  0.778
EIJ33859.1
Sulfur compound chelating protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: alv:Alvin_2112 SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur/thiosulfate oxidation protein SoxZ.
   
 0.769
EIJ34663.1
PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: tgr:Tgr7_2222 sulphur oxidation protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur oxidation protein SoxZ.
   
 0.769
EIJ34667.1
Sulfur compound chelating protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; InterPro IPR014880; KEGG: tgr:Tgr7_2222 sulphur oxidation protein SoxZ; PFAM: Sulphur oxidation protein SoxZ; SPTR: Sulfur oxidation protein SoxZ.
   
 0.769
EIJ33866.1
Periplasmic nitrate reductase subunit NapA apoprotein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; HAMAP: Nitrate reductase, large subunit, periplasmic; InterProIPR006963:IPR006656:IPR006657:IPR010051:IPR 006311; KEGG: dar:Daro_3515 nitrate reductase catalytic subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidor [...]
    
  0.766
EIJ34872.1
PFAM: Sulphur oxidation protein SoxZ; KEGG: tmz:Tmz1t_2818 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 0.733
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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