STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33530.1Metallophosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: rce:RC1_2249 Ser; PFAM: Metallophosphoesterase; SPTR: Ser. (270 aa)    
Predicted Functional Partners:
EIJ36233.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: lch:Lcho_3607 group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1.
     0.913
EIJ33532.1
PFAM: Protein of unknown function (DUF3419); COGs: COG5379 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; KEGG: hdn:Hden_2541 hypothetical protein; SPTR: S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase protein.
 
     0.880
EIJ33531.1
Methyltransferase type 12; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: agr:AGROH133_07480 S-adenosylmethionine-diacylgycerolhomoserine-N- methyltransferase; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; manually curated.
 
     0.861
EIJ33533.1
Ornithine-acyl(acyl carrier protein) N-acyltransferase; COGs: COG3176 Putative hemolysin; KEGG: tgr:Tgr7_2736 hemolysin; SPTR: Putative hemolysin.
 
    0.699
EIJ36476.1
PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; HAMAP: Lipid-A-disaccharide synthase; InterPro IPR003835; KEGG: alv:Alvin_2057 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19.
    
 0.593
EIJ36473.1
PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR020573:IPR001451; KEGG: pen:PSEEN4210 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosa [...]
     
 0.570
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.