STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33601.1CopG-like domain-containing protein DNA-binding; PFAM: Ribbon-helix-helix protein, copG family; InterPro IPR002145; KEGG: rlg:Rleg_6360 transcriptional regulator, CopG family; PFAM: CopG-like DNA-binding; SPTR: Putative uncharacterized protein XOO2590. (91 aa)    
Predicted Functional Partners:
EIJ33600.1
PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: hde:HDEF_0951 addiction module; PFAM: Plasmid stabilisation system; SPTR: Addiction module.
 
 
 0.992
EIJ37067.1
PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: hde:HDEF_0951 addiction module; PFAM: Plasmid stabilisation system; SPTR: Addiction module.
 
 
 0.969
EIJ36394.1
PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; InterPro IPR012753:IPR007712; KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system; SPTR: Addiction module toxin, RelE/StbE family; TIGRFAM: Addiction module toxin, RelE/StbE.
 
 
 0.901
EIJ37022.1
PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: rsq:Rsph17025_4221 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein.
 
 
 0.879
EIJ33256.1
Hypothetical protein; PFAM: Plasmid stabilisation system protein; KEGG: rsc:RCFBP_21230 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.808
EIJ33116.1
Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR000089:IPR013027:IPR004099:IPR006258; KEGG: gca:Galf_0424 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoami [...]
   
 
  0.662
EIJ33809.1
Dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099:IPR006258; KEGG: met:M446_1241 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase.
   
 
  0.662
EIJ34005.1
KEGG: tgr:Tgr7_0610 PilT protein-like protein; SPTR: PilT protein-like protein.
  
 
   0.596
EIJ36569.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: npu:Npun_R1163 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein-like.
  
 
   0.543
EIJ35121.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: xne:XNC1_2876 PilT protein, N-terminal; PFAM: PilT protein, N-terminal; SPTR: PilT protein, N-terminal.
  
 
   0.538
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.