Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
EIJ33608.1PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tmz:Tmz1t_3498 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related. (231 aa)    
Predicted Functional Partners:
EIJ33609.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: rru:Rru_A3703 ABC-3 transporter component; PFAM: ABC-3; SPTR: ABC-3 transporter component.
 
 0.998
EIJ33610.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: rpa:RPA0860 ABC transporter periplasmic binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: ABC transporter, periplasmic binding protein.
 
 
 0.994
EIJ35789.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: tgr:Tgr7_2749 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein.
 
 0.981
EIJ33592.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: meh:M301_1213 ABC-3 protein; PFAM: ABC-3; SPTR: ABC 3 transporter family protein.
  
 0.918
EIJ33618.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: meh:M301_1213 ABC-3 protein; PFAM: ABC-3; SPTR: ABC 3 transporter family protein.
  
 0.918
EIJ35787.1
ABC-type metal ion transporter, periplasmic subunit; PFAM: Periplasmic solute binding protein family; COGs: COG4531 ABC-type Zn2+ transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: ara:Arad_2765 zinc uptake ABC transporter; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Zinc uptake ABC transporter.
 
 
 0.914
EIJ33593.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: meh:M301_1212 periplasmic solute-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Putative uncharacterized protein.
  
 
 0.906
EIJ33619.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: meh:M301_1212 periplasmic solute-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Putative uncharacterized protein.
  
 
 0.906
EIJ33612.1
PFAM: Protein of unknown function (DUF2796); KEGG: pfv:Psefu_0679 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.864
EIJ33611.1
PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: tbd:Tbd_2534 CobW protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: CobW protein.
 
   
 0.798
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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