STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33612.1PFAM: Protein of unknown function (DUF2796); KEGG: pfv:Psefu_0679 hypothetical protein; SPTR: Putative uncharacterized protein. (229 aa)    
Predicted Functional Partners:
EIJ33613.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: app:CAP2UW1_4084 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type antimicrobial peptide transport system ATPase component.
 
 
  0.955
EIJ33614.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hch:HCH_00658 peptide ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type antimicrobial peptide transport system, permease component.
 
     0.948
EIJ33605.1
Putative lipoprotein; PFAM: Protein of unknown function (DUF3299); COGs: COG3495 conserved hypothetical protein; KEGG: hne:HNE_0188 putative lipoprotein; SPTR: Uncharacterized conserved secreted protein.
 
  
 0.901
EIJ33608.1
PFAM: ABC transporter; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tmz:Tmz1t_3498 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
  
 
 0.881
EIJ35005.1
Putative lipoprotein; PFAM: Protein of unknown function (DUF3299); COGs: COG3495 conserved hypothetical protein; KEGG: hne:HNE_0188 putative lipoprotein; SPTR: Putative lipoprotein.
 
  
 0.825
EIJ33609.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: rru:Rru_A3703 ABC-3 transporter component; PFAM: ABC-3; SPTR: ABC-3 transporter component.
  
 
 0.824
EIJ35003.1
PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: hch:HCH_00657 peptide ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein.
 
 
  0.814
EIJ33610.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: rpa:RPA0860 ABC transporter periplasmic binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: ABC transporter, periplasmic binding protein.
    
 0.796
EIJ35004.1
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hch:HCH_00658 peptide ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC-type antimicrobial peptide transport system, permease component.
 
     0.781
EIJ33611.1
PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: tbd:Tbd_2534 CobW protein; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: CobW protein.
  
  
 0.773
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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