STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33640.1ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: tgr:Tgr7_0454 binding-protein-dependent transporters inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component. (535 aa)    
Predicted Functional Partners:
EIJ33639.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: gpb:HDN1F_24330 ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Bacterial extracellular solute-binding protein, putative.
 
 
 0.996
EIJ33641.1
PFAM: ABC transporter; TOBE domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: tgr:Tgr7_0453 transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; SPTR: Transport system ATP-binding protein.
 
 
 0.994
EIJ33585.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: gpb:HDN1F_24330 ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Bacterial extracellular solute-binding protein, putative.
 
 
 0.987
EIJ33685.1
PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: eha:Ethha_2268 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A.
  
 
 0.840
EIJ35493.1
PFAM: ATP-sulfurylase; COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR002650; KEGG: yli:YALI0B08184g YALI0B08184p; PFAM: Sulphate adenylyltransferase; SPTR: Putative uncharacterized protein.
     
 0.787
EIJ36856.1
Sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); ATP sulphurylase; COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); HAMAP: Adenylyl-sulfate kinase; InterPro IPR002891:IPR002650; KEGG: sil:SPO0900 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; PFAM: Sulphate adenylyltransferase; Adenylylsulphate kinase, C-terminal; SPTR: Sulfate adenylyltransferase; TIGRFAM: Adenylylsulphate kinase, C-terminal.
     
 0.787
EIJ33123.1
PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR005893:IPR003593; KEGG: hch:HCH_02209 putrescine/spermidine ABC transporter ATPase; PFAM: ABC transporter-like; Transport-associated OB, type 2; SMART: ATPase, AAA+ type, core; SPTR: Spermidine/putrescine import ATP-binding protein PotA; TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit.
  
 
 0.654
EIJ34832.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: app:CAP2UW1_2964 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
    
 0.561
EIJ33121.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: hch:HCH_02207 spermidine/putrescine ABC transporter membrane protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type spermidine/putrescine transport system, permease component II.
    
  0.544
EIJ34897.1
PFAM: Thiazole biosynthesis protein ThiG; COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; HAMAP: Thiazole biosynthesis; InterPro IPR008867; KEGG: tgr:Tgr7_3236 thiazole biosynthesis family protein; PFAM: Thiazole biosynthesis; SPTR: Thiazole synthase.
  
  
 0.496
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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