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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33855.1Sulfide dehydrogenase (flavocytochrome), flavoprotein subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase, flavin-binding; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR015323:IPR006311; KEGG: cpc:Cpar_0010 flavocytochrome c sulphide dehydrogenase flavin-binding; PFAM: Flavocytochrome c sulphide dehydrogenase, flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Flavoprotein subunit of flavocytochrome c sulfide dehydrogenase. (433 aa)    
Predicted Functional Partners:
EIJ33856.1
PFAM: Cytochrome c; COGs: COG2863 Cytochrome c553; InterPro IPR003088; KEGG: mgm:Mmc1_2995 cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Sulfide dehydrogenase (Flavocytochrome), cytochrome c subunit.
 
 
 0.978
EIJ36681.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: hmo:HM1_1037 glutamate synthase [nadph] large chain; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Glutamate synthase [nadph] large chain.
    
 0.936
EIJ36043.1
PFAM: Cytochrome c; KEGG: tin:Tint_2898 cytochrome c class I; SPTR: Putative uncharacterized protein.
 
 
 0.933
EIJ36046.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: reh:H16_A3576 cytochrome c553; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein.
 
 
 0.931
EIJ36617.1
PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR004678:IPR003088; KEGG: avn:Avin_19980 cbb3-type cytochrome c oxidase subunit III; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase, cbb3-type, subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III.
   
 0.912
EIJ34949.1
Glycine oxidase; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: tgr:Tgr7_3234 glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; SPTR: Glycine oxidase ThiO.
  
 0.881
EIJ36212.1
PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain; COGs: COG4121 conserved hypothetical protein; HAMAP: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; InterPro IPR017610:IPR008471:IPR006076; KEGG: mep:MPQ_1374 tRNA u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc; PFAM: Protein of unknown function DUF752; FAD dependent oxidoreductase; SPTR: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; [...]
  
 0.881
EIJ36325.1
D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); HAMAP: D-amino acid dehydrogenase small subunit; InterPro IPR006076; KEGG: azl:AZL_e03880 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: D-amino acid dehydrogenase small subunit.
  
 0.881
EIJ36449.1
PFAM: Conserved region in glutamate synthase; Rieske [2Fe-2S] domain; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR017941:IPR002932; KEGG: jan:Jann_3121 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Rieske [2Fe-2S] iron-sulphur domain; SPTR: Glutamate synthase (NADPH).
  
 
 0.878
EIJ33192.1
PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P-protein; InterPro IPR020580:IPR003437; KEGG: csa:Csal_1811 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating] 1; TIGRFAM: Glycine cleavage system P-protein.
   
 
 0.874
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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