Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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EIJ34508.1PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: nhl:Nhal_1910 multidrug ABC transporter ATPase/permease; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein. (593 aa)    
Predicted Functional Partners:
EIJ36307.1
KEGG: hau:Haur_3960 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase.
  
 0.905
EIJ35240.1
PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR003593:IPR005074:IPR001140:IPR 003439; KEGG: nhl:Nhal_0833 ABC transporter; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; Cyclic nucleotide-binding; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; Cycli [...]
   
 0.804
EIJ36360.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: avn:Avin_18070 ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA superfamily.
   
 0.733
EIJ34741.1
PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: alv:Alvin_1729 histone deacetylase; PFAM: Histone deacetylase superfamily; SPTR: Histone deacetylase.
   
  0.719
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.718
EIJ33561.1
PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tgr:Tgr7_1113 peptidylprolyl isomerase FKBP-type; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Peptidyl-prolyl cis-trans isomerase.
  
 
 0.604
EIJ34506.1
KEGG: swo:Swol_2247 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
EIJ34507.1
PFAM: Helix-turn-helix; Domain of unknown function (DUF955); InterPro IPR001387:IPR010359; KEGG: dae:Dtox_3877 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein.
       0.590
EIJ34082.1
AMP-dependent synthetase and ligase; PFAM: Acyltransferase; AMP-binding enzyme; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR011701:IPR002123:IPR000873; KEGG: alv:Alvin_2716 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; Major facilitator superfamily MFS-1; SMART: Phospholipid/glycerol acyltransferase; SPTR: 2-acyl-glycerophospho-ethanolamine acyltransferase.
  
 
 0.587
EIJ36840.1
PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: nhl:Nhal_0252 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; SPTR: Deoxyribodipyrimidine photo-lyase.
    
   0.572
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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