STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34545.1COGs: COG1373 ATPase (AAA+ superfamily); KEGG: cph:Cpha266_0779 AAA family ATPase; SPTR: ATPase (AAA+ superfamily)-like protein. (386 aa)    
Predicted Functional Partners:
EIJ34882.1
PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; InterPro IPR011579:IPR004256; KEGG: taz:TREAZ_3109 dexx-box atpase; SPTR: ATPase.
  
     0.629
EIJ35449.1
Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: dol:Dole_2977 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.586
EIJ34546.1
PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: dhd:Dhaf_3445 addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; SPTR: Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein; TIGRFAM: RelB antitoxin.
 
     0.578
EIJ34547.1
Hypothetical protein; PFAM: PIN domain; KEGG: mbt:JTY_0247 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.478
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.