STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34547.1Hypothetical protein; PFAM: PIN domain; KEGG: mbt:JTY_0247 hypothetical protein; SPTR: Putative uncharacterized protein. (146 aa)    
Predicted Functional Partners:
EIJ34546.1
PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: dhd:Dhaf_3445 addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; SPTR: Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein; TIGRFAM: RelB antitoxin.
 
     0.867
EIJ34293.1
CopG family transcriptional regulator; PFAM: Uncharacterized protein conserved in bacteria (DUF2191); KEGG: tra:Trad_1394 CopG family transcriptional regulator; SPTR: Transcriptional regulator, CopG family.
   
   0.857
EIJ34801.1
SpoVT/AbrB domain-containing protein; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR007159; KEGG: aba:Acid345_4673 AbrB family transcriptional regulator; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family protein.
 
     0.741
EIJ32896.1
PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: pjd:Pjdr2_5288 von Willebrand factor A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein.
  
     0.651
EIJ36247.1
Transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339:IPR007159; KEGG: slt:Slit_0089 AbrB family transcriptional regulator; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB.
 
     0.607
EIJ35318.1
KEGG: app:CAP2UW1_2589 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.565
EIJ34991.1
PFAM: TIR domain; Tetratricopeptide repeat; NB-ARC domain; InterPro IPR000157:IPR001440:IPR019734; KEGG: amr:AM1_2759 TPR domain-containing protein; PFAM: Toll-Interleukin receptor; Tetratricopeptide TPR-1; SMART: Toll-Interleukin receptor; Tetratricopeptide repeat; SPTR: TPR domain protein.
  
     0.555
EIJ36644.1
Hypothetical protein; KEGG: smk:Sinme_5174 O-antigen polymerase; SPTR: Putative uncharacterized protein.
  
     0.526
EIJ33427.1
KEGG: app:CAP2UW1_3235 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.524
EIJ35950.1
PFAM: Uncharacterised protein family (UPF0175); KEGG: mar:MAE_43230 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.521
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.