STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34560.1Hypothetical protein; PFAM: Lecithin:cholesterol acyltransferase; KEGG: eba:ebA5037 hypothetical protein; SPTR: Putative uncharacterized protein. (1947 aa)    
Predicted Functional Partners:
EIJ34561.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: L,D-transpeptidase catalytic domain; COGs: COG1376 conserved hypothetical protein; InterPro IPR005490; KEGG: hna:Hneap_1152 ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; SPTR: ErfK/YbiS/YcfS/YnhG family protein.
       0.746
EIJ34991.1
PFAM: TIR domain; Tetratricopeptide repeat; NB-ARC domain; InterPro IPR000157:IPR001440:IPR019734; KEGG: amr:AM1_2759 TPR domain-containing protein; PFAM: Toll-Interleukin receptor; Tetratricopeptide TPR-1; SMART: Toll-Interleukin receptor; Tetratricopeptide repeat; SPTR: TPR domain protein.
  
     0.691
EIJ34562.1
PFAM: Bacterial SH3 domain; InterPro IPR013247:IPR003646; KEGG: gob:Gobs_3409 hypothetical protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region; SPTR: Putative uncharacterized protein.
       0.642
EIJ33564.1
Hypothetical protein; PFAM: Nitroreductase family; KEGG: pbs:Plabr_0816 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
EIJ36183.1
KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
EIJ36644.1
Hypothetical protein; KEGG: smk:Sinme_5174 O-antigen polymerase; SPTR: Putative uncharacterized protein.
  
     0.546
EIJ36838.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1083); InterPro IPR010502; KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
EIJ36422.1
KEGG: app:CAP2UW1_3018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
EIJ36725.1
SMC domain protein; COGs: COG4637 ATPase; InterPro IPR003395; KEGG: ppr:PBPRA2538 hypothetical protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Putative uncharacterized protein.
  
     0.522
EIJ36648.1
Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: fsu:Fisuc_2825 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase.
  
     0.521
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.