STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34566.1PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; HAMAP: Protein ApaG; InterPro IPR007474; KEGG: tgr:Tgr7_2722 ApaG domain protein; PFAM: ApaG; SPTR: Protein ApaG. (126 aa)    
Predicted Functional Partners:
EIJ34647.1
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; InterPro IPR004843:IPR004617; KEGG: tgr:Tgr7_2728 diadenosine tetraphosphatase; PFAM: Metallophosphoesterase; SPTR: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical).
  
  
 0.821
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.809
EIJ34565.1
Hypothetical protein.
       0.773
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.556
obgE
GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.556
EIJ34564.1
PFAM: Transglycosylase SLT domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: tgr:Tgr7_2404 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic transglycosylase catalytic.
       0.547
EIJ34569.1
KEGG: cpi:Cpin_0646 HNH nuclease; SPTR: SphI restriction endonuclease.
       0.541
EIJ34570.1
PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: xfa:XF1804 site-specific DNA-methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase subfamily.
       0.541
EIJ33707.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: pay:PAU_03740 hypothetical protein; PFAM: Protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
  
  
 0.495
EIJ34238.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: amv:ACMV_P2_00480 hypothetical protein; PFAM: Protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
  
  
 0.495
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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