Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ34570.1PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: xfa:XF1804 site-specific DNA-methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase subfamily. (328 aa)    
Predicted Functional Partners:
EIJ33357.1
PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: das:Daes_2381 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase.
  
  
  0.812
EIJ34569.1
KEGG: cpi:Cpin_0646 HNH nuclease; SPTR: SphI restriction endonuclease.
       0.793
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.778
obgE
GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.778
EIJ36566.1
PFAM: XisI protein; InterPro IPR014968; KEGG: cyj:Cyan7822_5113 XisI protein; PFAM: XisI protein; SPTR: XisI protein.
  
     0.722
EIJ34001.1
KEGG: npu:Npun_F4826 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.709
EIJ33429.1
PFAM: XisI protein; InterPro IPR014968; KEGG: mar:MAE_61050 FdxN element excision controlling factor protein; PFAM: XisI protein; SPTR: FdxN element excision controlling factor protein.
  
     0.707
rpmA
PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: aeh:Mlg_0846 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.556
EIJ34565.1
Hypothetical protein.
       0.541
EIJ34566.1
PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; HAMAP: Protein ApaG; InterPro IPR007474; KEGG: tgr:Tgr7_2722 ApaG domain protein; PFAM: ApaG; SPTR: Protein ApaG.
       0.541
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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