STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34577.1PFAM: Protein of unknown function (DUF3530); KEGG: rma:Rmag_0376 hypothetical protein; SPTR: Putative uncharacterized protein. (443 aa)    
Predicted Functional Partners:
EIJ34670.1
Hypothetical protein; PFAM: DsrE/DsrF-like family; InterPro IPR014865; KEGG: tbd:Tbd_1835 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
EIJ33503.1
KEGG: tbd:Tbd_0985 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.708
EIJ33781.1
KEGG: tgr:Tgr7_2200 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.693
EIJ32759.1
Hypothetical protein; KEGG: oaa:100079090 similar to hyaluronan-mediated motility receptor (RHAMM); SPTR: Putative uncharacterized protein.
  
     0.686
EIJ35015.1
PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: tgr:Tgr7_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain.
    
   0.667
EIJ33003.1
KEGG: mmt:Metme_3088 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.632
EIJ33545.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; InterPro IPR013766; KEGG: tgr:Tgr7_0629 hypothetical protein; PFAM: Thioredoxin domain; SPTR: Putative uncharacterized protein.
  
     0.624
EIJ33892.1
KEGG: hhy:Halhy_3307 hypothetical protein; SPTR: Peptidase families S8 and S53 domain protein.
  
     0.620
EIJ33556.1
KEGG: neu:NE0232 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.618
EIJ34399.1
SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: mgm:Mmc1_3265 DNA repair ATPase-like protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: ATPase involved in DNA repair-like protein.
  
     0.608
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.