Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ34581.1PFAM: Protein of unknown function (DUF465); InterPro IPR007420; KEGG: cps:CPS_0008 hypothetical protein; PFAM: Protein of unknown function DUF465; SPTR: Putative uncharacterized protein. (83 aa)    
Predicted Functional Partners:
EIJ33235.1
PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: tgr:Tgr7_2996 iron-sulfur cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG.
  
    0.770
EIJ34895.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: tmz:Tmz1t_2513 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR: Putative uncharacterized protein; TIGRFAM: polyphosphate kinase 2.
  
    0.767
EIJ33526.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: sil:SPO0224 polyphosphate kinase, putative; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate kinase, putative; TIGRFAM: polyphosphate kinase 2.
  
    0.751
EIJ36618.1
PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116:IPR001450; KEGG: tgr:Tgr7_0636 cytochrome c oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG.
   
    0.739
EIJ35615.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate:AMP phosphotransferase; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
   
    0.709
EIJ33164.1
Transcriptional regulator, TraR/DksA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: hch:HCH_00447 DnaK suppressor protein; SPTR: DnaK suppressor protein.
 
    0.559
EIJ36616.1
Hypothetical protein; PFAM: Cbb3-type cytochrome oxidase component FixQ; InterPro IPR008621; KEGG: shl:Shal_2199 Cbb3-type cytochrome oxidase component; SPTR: Putative Cbb3-type cytochrome oxidase, subunit 3.
   
    0.543
EIJ34580.1
PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: tgr:Tgr7_2796 OsmC/Ohr family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC/Ohr family protein.
       0.537
EIJ36284.1
PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR004678:IPR003088; KEGG: tgr:Tgr7_2997 cytochrome c oxidase cbb3-type, subunit III; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase cbb3-type, subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III.
  
    0.481
EIJ33448.1
PFAM: Cytochrome b(N-terminal)/b6/petB; COGs: COG3658 Cytochrome b; InterPro IPR011577; KEGG: shw:Sputw3181_1273 cytochrome b561; SPTR: Cytochrome b/b6 domain protein.
  
     0.473
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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