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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34581.1PFAM: Protein of unknown function (DUF465); InterPro IPR007420; KEGG: cps:CPS_0008 hypothetical protein; PFAM: Protein of unknown function DUF465; SPTR: Putative uncharacterized protein. (83 aa)    
Predicted Functional Partners:
EIJ36616.1
Hypothetical protein; PFAM: Cbb3-type cytochrome oxidase component FixQ; InterPro IPR008621; KEGG: shl:Shal_2199 Cbb3-type cytochrome oxidase component; SPTR: Putative Cbb3-type cytochrome oxidase, subunit 3.
   
    0.829
EIJ36284.1
PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR004678:IPR003088; KEGG: tgr:Tgr7_2997 cytochrome c oxidase cbb3-type, subunit III; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase cbb3-type, subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III.
  
    0.787
EIJ34895.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: tmz:Tmz1t_2513 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR: Putative uncharacterized protein; TIGRFAM: polyphosphate kinase 2.
  
    0.764
EIJ33235.1
PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: tgr:Tgr7_2996 iron-sulfur cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG.
  
    0.762
EIJ33526.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: sil:SPO0224 polyphosphate kinase, putative; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate kinase, putative; TIGRFAM: polyphosphate kinase 2.
  
    0.748
EIJ36618.1
PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116:IPR001450; KEGG: tgr:Tgr7_0636 cytochrome c oxidase accessory protein CcoG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG.
   
    0.729
EIJ35615.1
PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2; SPTR: Polyphosphate:AMP phosphotransferase; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
   
    0.705
EIJ33483.1
PFAM: Radical SAM superfamily; B12 binding domain; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR006158:IPR007197; KEGG: ttu:TERTU_0652 radical SAM domain-containing protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein.
   
    0.617
EIJ35371.1
PFAM: Radical SAM superfamily; B12 binding domain; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR006158:IPR007197; KEGG: mms:mma_0086 Mg-protoporphyrin IX monomethyl ester oxidative cyclase; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB; SPTR: Mg-protoporphyrin IX monomethyl ester oxidative cyclase.
   
    0.617
EIJ34580.1
PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: tgr:Tgr7_2796 OsmC/Ohr family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC/Ohr family protein.
       0.537
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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