STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34585.1PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family; COGs: COG0695 Glutaredoxin and related protein; InterPro IPR002109:IPR011900; KEGG: rcp:RCAP_rcc00198 glutaredoxin; PFAM: Glutaredoxin; SPTR: Glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC. (87 aa)    
Predicted Functional Partners:
EIJ35309.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.987
EIJ34584.1
PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; COGs: COG1952 Preprotein translocase subunit SecB; HAMAP: Bacterial protein export chaperone SecB; InterPro IPR003708; KEGG: shm:Shewmr7_0045 preprotein translocase subunit SecB; PFAM: Bacterial protein export chaperone SecB; SPTR: Protein-export protein secB; TIGRFAM: Bacterial protein export chaperone SecB.
  
  
 0.971
EIJ34586.1
PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tkm:TK90_2023 rhodanese; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein.
  
    0.891
EIJ34582.1
PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); HAMAP: Glutathione synthetase, prokaryotic; InterPro IPR004215:IPR004218:IPR006284; KEGG: tgr:Tgr7_2905 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; SPTR: Glutathione synthetase; TIGRFAM: Glutathione synthetase, prokaryotic.
 
  
 0.843
EIJ33537.1
PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422:IPR000926; KEGG: tgr:Tgr7_1561 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: DHBP synthase RibB.
    
  0.827
EIJ36529.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.805
EIJ34583.1
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; InterPro IPR011128:IPR006109; KEGG: tgr:Tgr7_3281 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+].
  
  
 0.797
EIJ35450.1
PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: rce:RC1_0809 peptide methionine-S-sulfoxide reductase MsrA, putative; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Peptide methionine sulfoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA.
   
 
 0.742
EIJ35455.1
PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: vvm:VVM_03000 peptide methionine sulfoxide reductase MsrA; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Peptide methionine sulfoxide reductase MsrA 2; TIGRFAM: Peptide methionine sulphoxide reductase MsrA.
   
 
 0.742
EIJ35459.1
PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: dfe:Dfer_0925 methionine sulfoxide reductase A; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Methionine sulfoxide reductase A; manually curated.
   
 
 0.742
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.