STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34589.1Carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: nhl:Nhal_0021 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: C-terminal processing peptidase subfamily; TIGRFAM: Peptidase S41A, C-terminal protease. (467 aa)    
Predicted Functional Partners:
EIJ34590.1
PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818:IPR006287; KEGG: tgr:Tgr7_3290 DJ-1 family protein; PFAM: ThiJ/PfpI; SPTR: DJ-1 family protein; TIGRFAM: DJ-1.
     
 0.816
EIJ34591.1
GTP cyclohydrolase subunit MoaC; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: nhl:Nhal_0518 molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region.
       0.788
EIJ34588.1
PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: pmk:MDS_4579 peptidase M23B; PFAM: Peptidase M23; SPTR: Peptidase M23B.
 
    0.766
EIJ35222.1
PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Transketolase, C-terminal domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR019752:IPR001450:IPR011766; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate [...]
   
   0.710
EIJ36348.1
PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335; KEGG: tgr:Tgr7_2066 preprotein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein.
  
 
  0.544
EIJ34821.1
Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: tkm:TK90_0493 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase.
 
  
 0.505
EIJ34592.1
Hypothetical protein.
       0.495
EIJ33497.1
phenylalanyl-tRNA synthetase beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR004532:IPR002547:IPR005146:IPR005147:IPR 005121; KEGG: tgr:Tgr7_1455 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/B4 tRNA-binding domain; tRNA-binding region; tRNA synthetase, B5; Phenylalanyl-tRNA synth [...]
   
 
 0.463
EIJ36470.1
Membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478:IPR004387:IPR008915; KEGG: tgr:Tgr7_1166 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Membrane-associated zinc metalloprotease; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase.
 
  
 0.453
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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