STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34716.1KEGG: tgr:Tgr7_3260 hypothetical protein; SPTR: Putative uncharacterized protein. (174 aa)    
Predicted Functional Partners:
EIJ35193.1
PFAM: Bacterial type II secretion system protein N; InterPro IPR000645; KEGG: vcj:VCD_001644 general secretion pathway protein N; PFAM: Type II secretion system protein N; SPTR: General secretion pathway protein N.
  
     0.580
EIJ36616.1
Hypothetical protein; PFAM: Cbb3-type cytochrome oxidase component FixQ; InterPro IPR008621; KEGG: shl:Shal_2199 Cbb3-type cytochrome oxidase component; SPTR: Putative Cbb3-type cytochrome oxidase, subunit 3.
  
     0.577
EIJ34717.1
PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; COGs: COG1391 Glutamine synthetase adenylyltransferase; HAMAP: Glutamate-ammonia-ligase adenylyltransferase; InterPro IPR005190:IPR013546; KEGG: tgr:Tgr7_0463 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; SPTR: Glutamate-ammonia-ligase adenylyltransferase.
       0.559
EIJ33725.1
COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; KEGG: gag:Glaag_1161 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; SPTR: Tfp pilus assembly protein tip-associated adhesin PilY1-like protein.
  
     0.546
EIJ36588.1
PFAM: Protein of unknown function (DUF540); COGs: COG2981 Uncharacterized protein involved in cysteine biosynthesis; InterPro IPR007496; KEGG: tgr:Tgr7_2030 hypothetical protein; PFAM: Protein of unknown function DUF540; SPTR: Putative uncharacterized protein.
  
     0.544
EIJ34651.1
Hypothetical protein; KEGG: tgr:Tgr7_2900 CheA signal transduction histidine kinase; SPTR: Putative CheA signal transduction histidine kinase.
  
     0.535
EIJ32756.1
PFAM: Rare lipoprotein B family; COGs: COG2980 Rare lipoprotein B; InterPro IPR007485; KEGG: nwa:Nwat_0452 rare lipoprotein B; PFAM: Rare lipoprotein B; SPTR: Rare lipoprotein B.
  
     0.526
EIJ34653.1
PFAM: CheW-like domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: ppw:PputW619_0474 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Twitching motility protein PilI.
  
     0.519
EIJ33479.1
KEGG: tgr:Tgr7_1230 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.510
EIJ35194.1
PFAM: General secretion pathway, M protein; COGs: COG3149 Type II secretory pathway component PulM; InterPro IPR007690; KEGG: tgr:Tgr7_0237 general secretion pathway M protein; PFAM: General secretion pathway M protein; SPTR: General secretion pathway M protein.
  
     0.502
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.