Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIJ34731.1Hypothetical protein; KEGG: aaa:Acav_4121 peptidase S1 and S6 chymotrypsin/Hap; SPTR: Putative Lysyl endopeptidase. (592 aa)    
Predicted Functional Partners:
EIJ34730.1
Hypothetical protein; KEGG: hhy:Halhy_2110 conserved repeat domain-containing protein; SPTR: Conserved repeat domain protein.
 
     0.855
EIJ33556.1
KEGG: neu:NE0232 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
EIJ32759.1
Hypothetical protein; KEGG: oaa:100079090 similar to hyaluronan-mediated motility receptor (RHAMM); SPTR: Putative uncharacterized protein.
  
     0.756
EIJ33186.1
KEGG: npu:Npun_F1375 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
EIJ35650.1
KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.740
EIJ34725.1
Hypothetical protein; KEGG: bid:Bind_1772 WD repeat-containing protein; SPTR: Conserved hypothetical WD-repeat protein alr2800.
  
     0.739
EIJ33892.1
KEGG: hhy:Halhy_3307 hypothetical protein; SPTR: Peptidase families S8 and S53 domain protein.
  
  
  0.737
EIJ36454.1
KEGG: hna:Hneap_2098 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.723
EIJ34814.1
Hypothetical protein; KEGG: cth:Cthe_2543 spore germination protein-like protein; SPTR: Lipoprotein LpqB, GerMN domain.
  
     0.722
EIJ33681.1
PDZ/DHR/GLGF domain protein; TIGRFAM: general secretion pathway protein C; COGs: COG3031 Type II secretory pathway component PulC; InterPro IPR001478; KEGG: hth:HTH_1757 hypothetical protein; PFAM: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein.
  
     0.716
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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