STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34737.1Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich domain; COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: tbd:Tbd_1645 heterodisulfide reductase, B subunit; PFAM: Cysteine-rich region, CCG; SPTR: Heterodisulfide reductase subunit B. (298 aa)    
Predicted Functional Partners:
EIJ34739.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR001450:IPR003813; KEGG: tbd:Tbd_1647 heterodisulfide reductase subunit A; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta.
 
 0.999
EIJ34740.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoA; PFAM: FAD binding domain; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953; KEGG: tbd:Tbd_1648 heterodisulfide reductase subunit A; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Heterodisulfide reductase, subunit A.
 
 0.998
EIJ34738.1
COGs: COG1150 Heterodisulfide reductase subunit C; KEGG: tbd:Tbd_1646 heterodisulfide reductase subunit C; SPTR: Heterodisulfide reductase subunit C.
 
 0.988
EIJ34734.1
Lactate utilization protein B/C; PFAM: Uncharacterised ACR, YkgG family COG1556; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: app:CAP2UW1_1942 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR: Protein containing DUF162.
  
 
 0.923
EIJ34425.1
PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit; InterPro IPR006137; KEGG: lpf:lpl2388 hypothetical protein; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; SPTR: Putative uncharacterized protein.
  
 0.910
EIJ36632.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.904
EIJ32909.1
PFAM: Nickel-dependent hydrogenase; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: azo:azo3787 ferredoxin hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; SPTR: Hydrogenase large subunit.
  
 0.895
EIJ32913.1
PFAM: Nickel-dependent hydrogenase; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: azo:azo3808 ferredoxin hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; SPTR: HupV.
  
 0.895
EIJ32921.1
PFAM: Nickel-dependent hydrogenase; COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit; InterPro IPR001501; KEGG: rva:Rvan_0974 Ni,Fe-hydrogenase I large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; SPTR: Ni,Fe-hydrogenase I large subunit.
  
 0.895
EIJ32939.1
PFAM: Nickel-dependent hydrogenase; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: slt:Slit_1617 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; SPTR: Hydrogenase 1, large subunit.
  
 0.895
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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