STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34748.1ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: scl:sce7794 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SPTR: Hypothetical protein. (377 aa)    
Predicted Functional Partners:
EIJ34749.1
KEGG: vap:Vapar_6229 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.949
EIJ34750.1
PFAM: VWA domain containing CoxE-like protein; InterPro IPR008912:IPR002035; KEGG: clj:CLJU_c06420 hypothetical protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein.
 
    0.949
EIJ35418.1
InterPro IPR007527; KEGG: cyn:Cyan7425_2427 zinc finger SWIM domain-containing protein; SPTR: Zinc finger SWIM domain protein.
 
     0.786
EIJ35414.1
PFAM: VWA domain containing CoxE-like protein; InterPro IPR008912; KEGG: amr:AM1_3312 hypothetical protein; PFAM: vWA containing CoxE-like; SPTR: Putative uncharacterized protein.
 
    0.785
EIJ35415.1
KEGG: cyn:Cyan7425_2430 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.785
EIJ35417.1
KEGG: cyn:Cyan7425_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.781
EIJ34746.1
Hypothetical protein.
       0.778
EIJ34747.1
Hypothetical protein.
       0.778
EIJ35519.1
PFAM: Ricin-type beta-trefoil lectin domain; InterPro IPR000772; KEGG: sur:STAUR_0521 hypothetical protein; PFAM: Ricin B lectin; SPTR: Uncharacterized protein.
  
     0.535
EIJ34745.1
PFAM: Xylose isomerase-like TIM barrel; InterPro IPR012307; PFAM: Xylose isomerase, TIM barrel domain.
       0.485
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.