STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34814.1Hypothetical protein; KEGG: cth:Cthe_2543 spore germination protein-like protein; SPTR: Lipoprotein LpqB, GerMN domain. (209 aa)    
Predicted Functional Partners:
EIJ33556.1
KEGG: neu:NE0232 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.797
EIJ33186.1
KEGG: npu:Npun_F1375 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.777
EIJ33892.1
KEGG: hhy:Halhy_3307 hypothetical protein; SPTR: Peptidase families S8 and S53 domain protein.
  
 
   0.775
EIJ32759.1
Hypothetical protein; KEGG: oaa:100079090 similar to hyaluronan-mediated motility receptor (RHAMM); SPTR: Putative uncharacterized protein.
  
     0.772
EIJ35650.1
KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
EIJ33450.1
KEGG: wsu:WS0049 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
EIJ36454.1
KEGG: hna:Hneap_2098 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
EIJ34725.1
Hypothetical protein; KEGG: bid:Bind_1772 WD repeat-containing protein; SPTR: Conserved hypothetical WD-repeat protein alr2800.
  
     0.762
EIJ33185.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: tra:Trad_0737 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase.
  
     0.760
EIJ36342.1
KEGG: fre:Franean1_2528 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.