STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ35043.1PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; HAMAP: Glycogen/starch synthases, ADP-glucose type; InterPro IPR013534:IPR001296:IPR011835; KEGG: tbd:Tbd_2057 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; SPTR: Glycogen synthase; TIGRFAM: Glycogen/starch synthases, ADP-glucose type. (487 aa)    
Predicted Functional Partners:
EIJ35044.1
1,4-alpha-glucan-branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; COGs: COG0296 1 4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan branching enzyme, core region; InterProIPR004193:IPR006047:IPR006048:IPR006589:IPR 006407; KEGG: tbd:Tbd_2058 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; S [...]
 
 0.999
EIJ35047.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; COGs: COG0448 ADP-glucose pyrophosphorylase; HAMAP: Glucose-1-phosphate adenylyltransferase; InterPro IPR005835:IPR011831; KEGG: tbd:Tbd_2061 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase.
 
 0.998
EIJ36774.1
PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; COGs: COG0448 ADP-glucose pyrophosphorylase; HAMAP: Glucose-1-phosphate adenylyltransferase; InterPro IPR011831:IPR005835; KEGG: tgr:Tgr7_2073 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase 2; TIGRFAM: Glucose-1-phosphate adenylyltransferase.
 
 
 0.995
EIJ35045.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: tbd:Tbd_2059 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; SPTR: 4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme); TIGRFAM: Glycoside hydrolase, family 77.
 
 
 0.991
EIJ35042.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011833; KEGG: tbd:Tbd_2056 phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase.
 
 
 0.982
EIJ36432.1
Maltooligosyl trehalose hydrolase; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589:IPR004193:IPR006047:IPR006048; KEGG: mes:Meso_2421 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; SMART: Glycosyl hydrolase, family 13, subfamily, catalyt [...]
 
 0.982
EIJ36353.1
Glycogen debranching enzyme GlgX; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR006589:IPR011837:IPR004193:IPR006047; KEGG: alv:Alvin_1627 glycogen debranching enzyme GlgX; PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: Glycogen de [...]
 
 0.974
EIJ33786.1
PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011833; KEGG: cyn:Cyan7425_1244 glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase.
 
 
 0.943
EIJ35046.1
PFAM: Glycosyl hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: tbd:Tbd_2060 glycosyl hydrolase family protein; PFAM: Glycoside hydrolase, family 57, core; SPTR: Glycosyl hydrolase family 57.
 
 
  0.919
EIJ33694.1
Glycoside hydrolase family 13 domain protein; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro IPR004193; KEGG: alt:ambt_09125 isoamylase protein-like protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Isoamylase protein-like protein.
  
 
 0.858
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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