STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ35339.1KEGG: gur:Gura_2002 hypothetical protein; SPTR: Putative uncharacterized protein. (87 aa)    
Predicted Functional Partners:
EIJ35340.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: gur:Gura_2003 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; SPTR: Uncharacterized protein Rv1991c/MT2046.
  
 
 0.960
EIJ35222.1
PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Transketolase, C-terminal domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR019752:IPR001450:IPR011766; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate [...]
     
 0.911
EIJ33140.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: gpb:HDN1F_22170 PemK-like protein; PFAM: PemK-like protein; SPTR: PemK-like protein.
  
 
 0.832
EIJ35341.1
PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: tgr:Tgr7_0080 DNA helicase II; PFAM: DNA helicase, UvrD/REP type; SPTR: DNA helicase II.
       0.773
EIJ35342.1
PFAM: Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR002912:IPR002376:IPR004810; KEGG: pmy:Pmen_3457 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase.
       0.528
EIJ35338.1
PFAM: Endonuclease I; COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: shg:Sph21_2508 endonuclease I; PFAM: Endonuclease I; SPTR: Endonuclease I.
       0.520
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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