Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
EIJ35348.1PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: tgr:Tgr7_2920 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase. (280 aa)    
Predicted Functional Partners:
EIJ35347.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: tgr:Tgr7_2921 hypothetical protein; PFAM: Protein of unknown function YGGT; SPTR: Putative uncharacterized protein.
  
    0.837
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
 
 
 0.833
EIJ35785.1
PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183:IPR002986; KEGG: fbl:Fbal_3697 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase.
 
  
 0.827
EIJ35616.1
Prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR005944:IPR000073; KEGG: tgr:Tgr7_0208 proline iminopeptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1.
     
  0.805
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
 
 
 0.803
EIJ33738.1
PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR001608:IPR011079:IPR000821; KEGG: tgr:Tgr7_0928 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; SPTR: Alanine racemase; TIGRFAM: Alanine racemase.
    
 0.801
EIJ36863.1
PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR015942; KEGG: sro:Sros_4590 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: Aspartate racemase.
     
  0.761
EIJ35346.1
UPF0235 protein yggU; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: TIGR00251 family protein; COGs: COG1872 conserved hypothetical protein; HAMAP: Protein of unknown function DUF167; InterPro IPR003746:IPR005228; KEGG: pmk:MDS_4479 hypothetical protein; PFAM: Protein of unknown function DUF167; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00251.
     
 0.732
EIJ34852.1
PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pde:Pden_2590 proline iminopeptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Proline iminopeptidase.
     
  0.726
EIJ36809.1
Arginase/agmatinase/formiminoglutamase; PFAM: Arginase family; TIGRFAM: arginase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: nve:NEMVE_v1g224716 hypothetical protein; PFAM: Ureohydrolase; SPTR: Predicted protein.
   
 
 0.631
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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