Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIJ35361.1PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: gca:Galf_0063 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase. (154 aa)    
Predicted Functional Partners:
EIJ33561.1
PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tgr:Tgr7_1113 peptidylprolyl isomerase FKBP-type; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Peptidyl-prolyl cis-trans isomerase.
 
 
    0.873
EIJ36417.1
Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein htpG; InterPro IPR003594:IPR001404:IPR020576; KEGG: afr:AFE_3158 heat shock protein HtpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Molecular chaperone HSP90 family.
   
 0.848
EIJ36471.1
PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: tgr:Tgr7_1167 outer membrane protein assembly complex, YaeT protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT.
   
 
 0.818
EIJ36320.1
PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: amc:MADE_01976 peptidyl-prolyl cis-trans isomerase B; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidylprolyl isomerase.
   
 0.800
EIJ36458.1
TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: alv:Alvin_0794 outer membrane assembly lipoprotein YfiO; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: Outer membrane assembly lipoprotein YfiO.
   
 
 0.796
EIJ33445.1
PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: tgr:Tgr7_0972 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein DnaK; TIGRFAM: Chaperone DnaK.
  
 0.784
EIJ35089.1
Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: mfa:Mfla_2658 aromatic hydrocarbon degradation membrane protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Membrane protein involved in aromatic hydrocarbon degradation.
    
 
 0.766
EIJ36194.1
Membrane protein involved in aromatic hydrocarbon degradation; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: slt:Slit_1705 membrane protein involved in aromatic hydrocarbon degradation; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Membrane protein involved in aromatic hydrocarbon degradation.
    
 
 0.766
rplV
LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
   
 
 0.765
EIJ33883.1
Chaperone protein hscA; PFAM: Hsp70 protein; TIGRFAM: Fe-S protein assembly chaperone HscA; COGs: COG0443 Molecular chaperone; HAMAP: ISC system FeS cluster assembly, HscA chaperone; InterPro IPR010236:IPR013126; KEGG: tgr:Tgr7_2055 2-alkenal reductase; PFAM: Heat shock protein 70; SPTR: Chaperone protein hscA homolog; TIGRFAM: ISC system FeS cluster assembly, HscA chaperone.
   
 0.754
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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